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Ligand · YDM

YDM · 1-[6-(dimethylamino)naphthalen-2-yl]propan-1-one

YDM, 1-[6-(dimethylamino)naphthalen-2-yl]propan-1-one (C15 H17 N O, 227.3 g/mol), in the MolNFT structures on GenesisL1: bound in 1 record (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the…

Component
YDM
Formula
C15 H17 N O
Class
ligand
Structures
1
PDB entries
1

Binding sites

YDM in 1 structure; the first of them:

  • 8FXT · Escherichia coli periplasmic Glucose-Binding Protein glucose complex: Acrylodan conjugate… · YDM A401 · binds TYR10, ASP14, ASN43, LYS92, GLU149, HIS152, MET182, CYS183 and 1 more

Residues it binds most

ASN 1, ASP 1, CYS 1, GLN 1, GLU 1, HIS 1, LYS 1, MET 1, TYR 1 (residue and the binding sites it lines).

Found with

  • CA · Calcium ion
  • BGC · beta-D-glucopyranose
  • GLC · alpha-D-glucopyranose

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