GL1X · GenesisL1 explorer

Ligand · XYH

XYH · Xylarohydroxamate

XYH, Xylarohydroxamate (C5 H8 N O7 -1, 194.1 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
XYH
Formula
C5 H8 N O7 -1
Class
ligand
Structures
4
PDB entries
2

Binding sites

XYH in 4 structures; the first of them:

  • 1EC9 · E. COLI glucarate dehydratase bound to xylarohydroxamate · XYH A499 · binds ASN27, HIS32, THR103, PHE104, TYR150, PHE152, LYS205, LYS207 and 10 more
  • 4MMW · Crystal structure of D-glucarate dehydratase from Agrobacterium tumefaciens complexed… · XYH A404 · binds GLY23, HIS24, CYS139, LYS169, HIS171, MET174, ASP206, HIS209 and 7 more
  • 1EC9 · E. COLI glucarate dehydratase bound to xylarohydroxamate · XYH A499 · binds ASN27, HIS32, THR103, PHE104, TYR150, PHE152, LYS205, LYS207 and 10 more
  • 4MMW · Crystal structure of D-glucarate dehydratase from agrobacterium tumefaciens complexed… · XYH A404 · binds GLY23, HIS24, CYS139, LYS169, HIS171, MET174, ASP206, HIS209 and 7 more

Residues it binds most

ASN 8, HIS 12, GLU 12, LYS 12, ARG 12, ASP 12, PHE 8, SER 8, THR 8, TYR 8 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • LLH · (2R,3S,4R)-2,3,4-trihydroxy-5-(hydroxyamino)-5-oxopentanoic acid
  • CL · Chloride ion
  • IPA · Isopropyl alcohol
  • PGE · Triethylene glycol

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.