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Ligand · XQS

XQS · Sibrafiban (active form)

XQS, Sibrafiban (active form) (C18 H24 N4 O5, 376.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with…

Component
XQS
Formula
C18 H24 N4 O5
Class
ligand
Structures
2
PDB entries
2

Binding sites

XQS in 2 structures; the first of them:

  • 7L8P · Integrin ALPHAIIBBETA3 in complex with sibrafiban · XQS B2005 · binds PHE160, TYR189, TYR190, LEU192, ASP224, SER225, PHE231, SER121 and 5 more
  • 7UKO · Integrin ALAPHIIBBETA3 complex with sibrafiban (mn) · XQS B2005 · binds PHE160, TYR189, TYR190, LEU192, ASP224, SER225, PHE231, SER121 and 6 more

Residues it binds most

TYR 4, SER 4, ARG 4, PHE 4, ASN 4, ASP 4, GLU 4, LEU 4 (residue and the binding sites it lines).

Found with

  • CA · Calcium ion
  • BMA · beta-D-mannopyranose
  • MAN · alpha-D-mannopyranose
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • CL · Chloride ion
  • SO4 · Sulfate ion
  • GOL · Glycerol
  • MG · Magnesium ion
  • MN · Manganese (II) ion

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