Ligand · XP6

XP6 · Norbaeocystin

XP6, Norbaeocystin (C10 H13 N2 O4 P, 256.2 g/mol), in the MolNFT structures on GenesisL1: bound in 5 records (5 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component: XP6
Formula: C10 H13 N2 O4 P
Class: ligand
Structures: 5
PDB entries: 5

Binding sites

XP6 in 5 structures; the first of them:

8PB3 · PsiM in complex with SAH and norbaeocystin, monoclinic crystal form · XP6 A402 · binds LEU68, THR71, ARG75, ASN183, PRO184, PRO185, PHE186, TYR187 and 6 more
8PB4 · PsiM in complex with SAH and norbaeocystin, orthorhombic crystal form · XP6 A402 · binds LEU68, THR71, ARG75, ASN183, PRO184, PRO185, PHE186, TYR187 and 6 more
8PB5 · PsiM in complex with sinefungin and norbaeocystin · XP6 A402 · binds LEU68, THR71, ARG75, ASN183, PRO184, PRO185, PHE186, TYR187 and 6 more
9FMH · PsiM N247M in complex with SAH and norbaeocystin · XP6 A402 · binds LEU68, THR71, ARG75, ASN183, PRO184, PRO185, PHE186, TYR187 and 6 more
9FMI · PsiM N247A in complex with SAH and norbaeocystin · XP6 A402 · binds LEU68, THR71, ARG75, ASN183, PRO184, PRO185, PHE186, TYR187 and 6 more

Residues it binds most

ARG 6, PHE 6, PRO 6, ALA 6, ASN 6, GLY 6, HIS 6, LEU 6, MET 6, THR 6 (residue and the binding sites it lines).

Found with

CL · Chloride ion
SAH · S-adenosyl-L-homocysteine
SFG · Sinefungin
MG · Magnesium ion

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