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Ligand · XNW

XNW · (1R,2R,4S,5R)-1,4,5-trihydroxy-2-(4-methoxybenzyl)-3-oxocyclohexanecarboxylic acid

XNW, (1R,2R,4S,5R)-1,4,5-trihydroxy-2-(4-methoxybenzyl)-3-oxocyclohexanecarboxylic acid (C15 H18 O7, 310.3 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5…

Component
XNW
Formula
C15 H18 O7
Class
ligand
Structures
4
PDB entries
2

Binding sites

XNW in 4 structures; the first of them:

  • 2XB8 · Structure of Mycobacterium tuberculosis type II dehydroquinase in complex with inhibitor… · XNW A1144 · binds PRO11, ASN12, LEU13, ARG15, LEU16, ARG19, TYR24, ASN75 and 10 more
  • 2XB9 · Structure of Helicobacter pylori type II dehydroquinase in complex with inhibitor… · XNW A201 · binds PRO9, ASN10, LEU11, MET13, LEU14, ARG17, TYR22, ASN76 and 12 more
  • 2XB8 · Structure of mycobacterium tuberculosis type II dehydroquinase in complex with inhibitor… · XNW A1144 · binds PRO11, ASN12, LEU13, ARG15, LEU16, ARG19, TYR24, ASN75 and 10 more
  • 2XB9 · Structure of helicobacter pylori type II dehydroquinase in complex with inhibitor… · XNW A201 · binds PRO9, ASN10, LEU11, MET13, LEU14, ARG17, TYR22, ASN76 and 12 more

Residues it binds most

ARG 6, LEU 6, ASN 6, HIS 6, GLY 6, VAL 6, ILE 6, PRO 6, TYR 6, ALA 4 (residue and the binding sites it lines).

Found with

  • SO4 · Sulfate ion
  • CIT · Citric acid
  • TRS · 2-amino-2-hydroxymethyl-propane-1,3-diol

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