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Ligand · XMO

XMO · N-hydroxy-5'-O-(2-methylpropanoyl)cytidine

XMO, N-hydroxy-5'-O-(2-methylpropanoyl)cytidine (C13 H19 N3 O7, 329.3 g/mol), in the MolNFT structures on GenesisL1: bound in 3 records (3 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the…

Component
XMO
Formula
C13 H19 N3 O7
Class
ligand
Structures
3
PDB entries
3

Binding sites

XMO in 3 structures; the first of them:

  • 8TZ7 · Cryo-EM structure of bovine concentrative nucleoside transporter 3 in complex with… · XMO A801 · binds PHE290, VAL294, LEU295, VAL298, PHE301, GLY346, GLN347, THR348 and 15 more
  • 8TZ9 · Cryo-EM structure of bovine concentrative nucleoside transporter 3 in complex with… · XMO B801 · binds PHE290, VAL294, VAL298, GLY346, GLN347, THR348, GLU349, ALA378 and 11 more
  • 8TZD · Cryo-EM structure of bovine concentrative nucleoside transporter 3 in complex with… · XMO A701 · binds PHE289, PHE290, VAL294, GLY346, GLN347, THR348, GLU349, ALA378 and 11 more

Residues it binds most

PHE 9, VAL 9, ASN 9, GLU 9, SER 9, ILE 9, LEU 8, ALA 9, GLN 9, GLY 9 (residue and the binding sites it lines).

Found with

  • LBN · 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine

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