GL1X · GenesisL1 explorer

Ligand · XBX

XBX · (2~{R})-2-[2-[(5~{R},6~{R},7~{S},9~{S},11~{R},16~{R},18~{S},19~{S})-6-[(3~{R})-3-carboxy-5-oxidanyl-5-oxidanylidene-pentanoyl]oxy-19-(hexadecanoylamino)-5,9-dimethyl-11,16,18-tris(oxidanyl)icosan-7-yl]oxy-2-oxidanylidene-ethyl]butanedioic acid

XBX, (2~{R})-2-[2-[(5~{R},6~{R},7~{S},9~{S},11~{R},16~{R},18~{S},19~{S})-6-[(3~{R})-3-carboxy-5-oxidanyl-5-oxidanylidene-pentanoyl]oxy-19-(hexadecanoylamino)-5,9-dimethyl-11,16,18-tris(oxidanyl)icosan-7-yl]oxy-2-oxidanylidene-ethyl]butanedi…

Component
XBX
Formula
C50 H89 N O16
Class
ligand
Structures
1
PDB entries
1

Binding sites

XBX in 1 structure; the first of them:

  • 8QZ7 · Structure of human ceramide synthase 6 (CerS6) in complex with N-palmitoyl fumonisin B1 · XBX A401 · binds ARG131, TRP166, TYR182, TYR189, MET208, HIS211, HIS212, SER215 and 31 more

Residues it binds most

LEU 2, PHE 2, TYR 2, HIS 2, ILE 2, SER 2, TRP 2, ARG 2, ASN 2, LYS 2 (residue and the binding sites it lines).

Found with

  • PC1 · 1,2-diacyl-sn-glycero-3-phosphocholine
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose

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