Ligand · X9E

X9E · (4R,5S)-3-((2R,3S,4S,E)-2,6-diethyl-9-((2R,3R)-2-ethyl-3-methyloxiran-2-yl)-3-hydroxy-4-methylnon-6-enoyl)-4-methyl-5-phenyloxazolidin-2-one

X9E, (4R,5S)-3-((2R,3S,4S,E)-2,6-diethyl-9-((2R,3R)-2-ethyl-3-methyloxiran-2-yl)-3-hydroxy-4-methylnon-6-enoyl)-4-methyl-5-phenyloxazolidin-2-one (C29 H43 N O5, 485.7 g/mol), in the MolNFT structures on GenesisL1: bound in 1 record (1 PDB…

Component: X9E
Formula: C29 H43 N O5
Class: ligand
Structures: 1
PDB entries: 1

Binding sites

X9E in 1 structure; the first of them:

8WVT · Crystal structure of Lsd18 in complex with ligands · X9E A704 · binds ALA70, ILE72, TRP74, TYR218, LEU235, SER237, HIS239, VAL252 and 7 more

Residues it binds most

SER 1, TYR 1, VAL 1, ALA 1, ASN 1, GLY 1, HIS 1, ILE 1, LEU 1, PRO 1 (residue and the binding sites it lines).

Found with

A1LWM · (4R,5S)-4-methyl-5-phenyl-3-((2R,3S,4S,6E,10E)-2,6,10-triethyl-3-hydroxy-4-methyldodeca-6,10-dienoyl)oxazolidin-2-one
FAD · Flavin-adenine dinucleotide
CL · Chloride ion
DMS · Dimethyl sulfoxide

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