Ligand · X6Y
X6Y · 2-O-sulfo-alpha-L-fucopyranose
X6Y, 2-O-sulfo-alpha-L-fucopyranose (C6 H12 O8 S, 244.2 g/mol), in the MolNFT structures on GenesisL1: bound in 8 records (8 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found…
- Component
- X6Y
- Formula
- C6 H12 O8 S
- Class
- sugar
- Structures
- 8
- PDB entries
- 8
Binding sites
X6Y in 8 structures; the first of them:
- 8YA7 · endo-1,3-fucanase Fun168A,complex with fucotetraose · X6Y B1 · binds MET67, GLU93, LYS94, TYR127, ASN129, TYR132, TRP134, ARG170 and 6 more
- 9JOF · Complex structure of endo-1,3-fucanase (FUN168D) from GH168 family with fucotriose · X6Y C1 · binds HIS41, GLU65, LYS66, TYR99, ASN101, ILE104, TRP106, MET134 and 8 more
- 9JOG · Complex structure of endo-1,3-fucanase (FUN168D) with fucotetraose from holothuria… · X6Y C1 · binds HIS41, GLU65, LYS66, TYR99, ASN101, ILE104, TRP106, MET134 and 8 more
- 9JOH · Complex structure of endo-1,3-fucanase (FUN168D) with fucotetraose from isostichopus… · X6Y D1 · binds HIS41, GLU65, LYS66, TYR99, ASN101, ILE104, TRP106, MET134 and 7 more
- 9JOO · Complex structure of endo-1,3-fucanase (FUN168E) with fucotetraoses · X6Y B1 · binds HIS22, GLU48, LYS49, TYR80, ASN82, LEU85, TYR87, LYS114 and 6 more
- 9JP2 · Complex structure of endo-1,3-fucanase with fucotetraose · X6Y B1 · binds MET32, GLU58, LYS59, TYR92, ASN94, TYR97, TRP99, ARG135 and 6 more
- 9JP3 · Complex structure of endo-1,3-fucanase mutant D171A with fucotetraose · X6Y B1 · binds MET32, GLU58, LYS59, TYR92, ASN94, TYR97, TRP99, ARG135 and 6 more
- 9K1G · COMPLEX STRUCTURE OF ENDO-1,3-FUCANASE (FUN174Sb) FROM GH174 FAMILY WITH FUCOTETRAOSE · X6Y C1 · binds ASP129, VAL135, PHE145, HIS147, TYR152, ASN227, TRP230, PHE261
Residues it binds most
TYR 14, GLU 15, ASN 14, TRP 20, LYS 15, PHE 12, HIS 12, ASP 11, ARG 9, ALA 9 (residue and the binding sites it lines).
Found with
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