Ligand · X2Y
X2Y · 2,4-di-O-sulfo-alpha-L-fucopyranose
X2Y, 2,4-di-O-sulfo-alpha-L-fucopyranose (C6 H12 O11 S2, 324.3 g/mol), in the MolNFT structures on GenesisL1: bound in 8 records (8 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…
- Component
- X2Y
- Formula
- C6 H12 O11 S2
- Class
- sugar
- Structures
- 8
- PDB entries
- 8
Binding sites
X2Y in 8 structures; the first of them:
- 8YA7 · endo-1,3-fucanase Fun168A,complex with fucotetraose · X2Y B3 · binds LYS94, ASN95, TYR98, TRP134, PHE136, ASN171
- 9JOF · Complex structure of endo-1,3-fucanase (FUN168D) from GH168 family with fucotriose · X2Y C2 · binds ARG43, GLU65, LYS66, TRP106, TYR332
- 9JOG · Complex structure of endo-1,3-fucanase (FUN168D) with fucotetraose from holothuria… · X2Y C4 · binds ARG43, ASN336, TRP106, PRO135, ASN136, SER138
- 9JOH · Complex structure of endo-1,3-fucanase (FUN168D) with fucotetraose from isostichopus… · X2Y D2 · binds ARG43, GLU65, LYS66, TRP106, TYR332
- 9JOO · Complex structure of endo-1,3-fucanase (FUN168E) with fucotetraoses · X2Y B2 · binds GLU48, LYS49, TYR87, LYS114, TRP262, ILE263, TYR306, ARG307
- 9JP2 · Complex structure of endo-1,3-fucanase with fucotetraose · X2Y B3 · binds LYS59, TRP99, PHE101
- 9JP3 · Complex structure of endo-1,3-fucanase mutant D171A with fucotetraose · X2Y B2 · binds GLU58, LYS59, TRP99, ARG135, ARG136, TRP316, THR317
- 9K1G · COMPLEX STRUCTURE OF ENDO-1,3-FUCANASE (FUN174Sb) FROM GH174 FAMILY WITH FUCOTETRAOSE · X2Y C2 · binds TRP225, ASN227, TRP230, PHE261, GLY262, ARG320, VAL336, ILE338
Residues it binds most
TRP 12, ARG 11, LYS 8, ASN 6, TYR 6, GLU 6, PHE 5, ILE 4, GLY 2, PRO 2 (residue and the binding sites it lines).
Found with
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