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Ligand · X2D

X2D · 6-{[(3R,4R)-4-(2-{[(1R,2S)-2-(3-chlorophenyl)cyclopropyl]amino}ethoxy)pyrrolidin-3-yl]methyl}-4-methylpyridin-2-amine

X2D, 6-{[(3R,4R)-4-(2-{[(1R,2S)-2-(3-chlorophenyl)cyclopropyl]amino}ethoxy)pyrrolidin-3-yl]methyl}-4-methylpyridin-2-amine (C22 H29 Cl N4 O, 400.9 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every…

Component
X2D
Formula
C22 H29 Cl N4 O
Class
ligand
Structures
4
PDB entries
2

Binding sites

X2D in 4 structures; the first of them:

  • 3RQL · Structure of the neuronal nitric oxide synthase heme domain in complex with… · X2D A800 · binds MET336, LEU337, ARG414, GLN478, PRO565, VAL567, PHE584, SER585 and 7 more
  • 3RQO · Structure of the endothelial nitric oxide synthase heme domain in complex with… · X2D A800 · binds VAL106, LEU107, ARG185, GLN249, PRO336, VAL338, PHE355, SER356 and 7 more
  • 3RQL · Structure of the neuronal nitric oxide synthase heme domain in complex with… · X2D A800 · binds MET336, LEU337, ARG414, GLN478, PRO565, VAL567, PHE584, SER585 and 7 more
  • 3RQO · Structure of the endothelial nitric oxide synthase heme domain in complex with… · X2D A800 · binds VAL106, LEU107, ARG185, GLN249, PRO336, VAL338, PHE355, SER356 and 7 more

Residues it binds most

TRP 8, TYR 8, VAL 8, ARG 8, GLN 8, GLU 8, GLY 8, LEU 8, PHE 8, PRO 8 (residue and the binding sites it lines).

Found with

  • H4B · 5,6,7,8-tetrahydrobiopterin
  • HEM · Protoporphyrin IX containing Fe
  • ZN · Zinc ion
  • ACT · Acetate ion
  • CAD · Cacodylic acid
  • GOL · Glycerol

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