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Ligand · WB4

WB4 · N-{(1S)-5-{[2-(methylsulfanyl)benzene-1-carbonyl]amino}-1-[5-(naphthalen-2-yl)-1H-imidazol-2-yl]pentyl}-1,3-thiazole-5-carboxamide

WB4, N-{(1S)-5-{[2-(methylsulfanyl)benzene-1-carbonyl]amino}-1-[5-(naphthalen-2-yl)-1H-imidazol-2-yl]pentyl}-1,3-thiazole-5-carboxamide (C30 H29 N5 O2 S2, 555.7 g/mol), in the MolNFT structures on GenesisL1: bound in 1 record (1 PDB…

Component
WB4
Formula
C30 H29 N5 O2 S2
Class
ligand
Structures
1
PDB entries
1

Binding sites

WB4 in 1 structure; the first of them:

  • 7KBH · Structure of human HDAC2 in complex with a 2-substituted benzamide inhibitor (compound 16) · WB4 A407 · binds GLY28, HIS29, PRO30, MET31, ARG35, GLU99, ASP100, LEU140 and 11 more

Residues it binds most

GLY 3, HIS 3, ASP 3, LEU 3, PHE 3, ARG 3, CYS 3, MET 3, PRO 3, GLU 2 (residue and the binding sites it lines).

Found with

  • CA · Calcium ion
  • ZN · Zinc ion
  • PEG · Di(hydroxyethyl)ether

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