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Ligand · VTQ

VTQ · Rrr-alpha-tocopherylquinone

VTQ, Rrr-alpha-tocopherylquinone (C29 H50 O3, 446.7 g/mol), in the MolNFT structures on GenesisL1: bound in 1 record (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
VTQ
Formula
C29 H50 O3
Class
ligand
Structures
1
PDB entries
1

Binding sites

VTQ in 1 structure; the first of them:

  • 8ZEE · Cryo-EM structure of an intermediate-state PSII-PRF2' complex during the process of… · VTQ X201 · binds TRP21, ARG26, VAL28, LEU35, PHE38, PRO39, PHE15, THR16 and 7 more

Residues it binds most

VAL 1, ALA 1, LEU 1, PHE 1, ARG 1, ASP 1, ILE 1, PRO 1, THR 1, TRP 1 (residue and the binding sites it lines).

Found with

  • BCR · Beta-carotene
  • BCT · Bicarbonate ion
  • CLA · Chlorophyll A
  • DGD · Digalactosyl diacyl glycerol (dgdg)
  • HEM · Protoporphyrin IX containing Fe
  • LHG · 1,2-dipalmitoyl-phosphatidyl-glycerole
  • LMG · 1,2-distearoyl-monogalactosyl-diglyceride
  • PHO · Pheophytin A
  • PL9 · 2,3-dimethyl-5-(3,7,11,15,19,23,27,31,35-nonamethyl-2, 6,10,14,18,22,26,30,34-hexatriacontanonaenyl-2,5-cyclohexadiene-1,4-dione-2,3-dimethyl-5-solanesyl-1,4-benzoquinone
  • SQD · 1,2-di-O-acyl-3-O-[6-deoxy-6-sulfo-alpha-D-glucopyranosyl]-sn-glycerol
  • FE2 · Fe (II) ion

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