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Ligand · VK9

VK9 · ~{N}-[3-[2-(6-aminopurin-9-yl)ethanoylamino]propyl]-5-[(3~{R})-1,2-dithiolan-3-yl]pentanamide

VK9, ~{N}-[3-[2-(6-aminopurin-9-yl)ethanoylamino]propyl]-5-[(3~{R})-1,2-dithiolan-3-yl]pentanamide (C18 H27 N7 O2 S2, 437.6 g/mol), in the MolNFT structures on GenesisL1: bound in 1 record (1 PDB entry). Every binding site with its…

Component
VK9
Formula
C18 H27 N7 O2 S2
Class
ligand
Structures
1
PDB entries
1

Binding sites

VK9 in 1 structure; the first of them:

  • 8CRL · Crystal structure of LplA1 in complex with the inhibitor C3 (Listeria monocytogenes) · VK9 A401 · binds TYR36, ILE43, ARG69, GLY74, ALA75, VAL76, TYR77, HIS78 and 16 more

Residues it binds most

ASN 1, GLY 1, VAL 1, ALA 1, HIS 1, LEU 1, TYR 1, ARG 1, ASP 1, ILE 1 (residue and the binding sites it lines).

Found with

  • CA · Calcium ion
  • NA · Sodium ion
  • EDO · 1,2-ethanediol

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