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Ligand · VB8

VB8 · 4-[(4,4-dimethylpiperidin-1-yl)methyl]-2-methylsulfanyl-~{N}-[[(3~{R})-3-oxidanyl-1-[6-[(phenylmethyl)amino]pyrimidin-4-yl]piperidin-3-yl]methyl]benzamide

VB8, 4-[(4,4-dimethylpiperidin-1-yl)methyl]-2-methylsulfanyl-~{N}-[[(3~{R})-3-oxidanyl-1-[6-[(phenylmethyl)amino]pyrimidin-4-yl]piperidin-3-yl]methyl]benzamide (C33 H44 N6 O2 S, 588.8 g/mol), in the MolNFT structures on GenesisL1: bound in…

Component
VB8
Formula
C33 H44 N6 O2 S
Class
ligand
Structures
2
PDB entries
1

Binding sites

VB8 in 2 structures; the first of them:

  • 7OEM · Crystal structure of the human METTL3-METTL14 complex with compound UOZ120 · VB8 A603 · binds CYS376, ASP377, ILE378, ARG379, ASP395, PRO396, PRO397, GLY407 and 16 more
  • 7OEM · Crystal structure of the human METTL3-METTL14 complex with compound UOZ120 · VB8 A603 · binds CYS376, ASP377, ILE378, ARG379, ASP395, PRO396, PRO397, GLY407 and 16 more

Residues it binds most

GLY 2, PRO 2, ARG 2, ASP 2, THR 2, TRP 2, ASN 2, CYS 2, GLN 2, GLU 2 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • ACT · Acetate ion

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