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Ligand · UQ2

UQ2 · Ubiquinone-2

UQ2, Ubiquinone-2 (C19 H26 O4, 318.4 g/mol), in the MolNFT structures on GenesisL1: bound in 6 records (5 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
UQ2
Formula
C19 H26 O4
Class
ligand
Structures
6
PDB entries
5

Binding sites

UQ2 in 6 structures; the first of them:

  • 7DGQ · Activity optimized supercomplex state1 · UQ2 A2201 · binds SER10, ARG11, LEU13, GLU14, GLY15, ARG17
  • 7JZ2 · Succinate: qui oxidoreductase SQR from E.coli K12 · UQ2 D202 · binds PRO160, TRP164, ILE209, LEU15, PHE20, ALA24, SER27, ILE28 and 3 more
  • 7Q7Q · Lipidic cubic phase serial femtosecond crystallography structure of a photosynthetic… · UQ2 LLL309 · binds VAL182, ALA186, LEU189, HIS190, LEU193, ILE194, GLU212, ASN213 and 9 more
  • 8A1U · Sodium pumping NADH-qui oxidoreductase with substrates NADH and Q2 · UQ2 B507 · binds LEU26, ALA29, ALA30, LEU33, PHE137, ILE138, GLY141, PHE142 and 7 more
  • 8A1V · Sodium pumping NADH-qui oxidoreductase with substrate Q2 · UQ2 B605 · binds LEU26, ALA29, ALA30, LEU33, PHE137, ILE138, GLY141, PHE142 and 6 more
  • 7JZ2 · Succinate: quinone oxidoreductase sqr from E.COLI K12 · UQ2 D202 · binds PRO160, TRP164, ILE209, LEU15, PHE20, ALA24, SER27, ILE28 and 2 more

Residues it binds most

PHE 10, ILE 9, LEU 11, ALA 9, VAL 9, TRP 7, SER 8, TYR 7, PRO 6, ARG 4 (residue and the binding sites it lines).

Found with

  • 3PE · 1,2-diacyl-sn-glycero-3-phosphoethanolamine
  • FES · Fe2/s2 (inorganic) cluster
  • FAD · Flavin-adenine dinucleotide
  • NA · Sodium ion
  • FMN · Flavin mononucleotide
  • HEM · Protoporphyrin IX containing Fe
  • SF4 · Iron/sulfur cluster
  • F3S · FE3-S4 cluster
  • HEC · Heme C
  • RBF · Riboflavin
  • LMT · Dodecyl-beta-D-maltoside
  • BCB · Bacteriochlorophyll B

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