UPU · [(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl (2R,3S, 4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-4-hydroxy-2-(hydroxymethyl)tetrahydrofuran-3-yl hydrogen (S)-phosphate

Binding sites

UPU in 2 structures; the first of them:

• 5W0N · Structure of human TUT7 catalytic module (CM) in complex with UMPNPP and U2 RNA · UPU A1403 · binds PHE1045, ASP1058, ASP1060, ILE1099, THR1101, ALA1102, VAL1104, ILE1106 and 12 more
• 5W0N · Structure of human TUT7 catalytic module (cm) in complex with umpnpp and U2 RNA · UPU A1403 · binds PHE1045, ASP1058, ASP1060, ILE1099, ALA1102, VAL1104, ILE1106, ASP1119 and 7 more

Residues it binds most

ASP 6, ILE 6, ALA 6, SER 6, ASN 6, PHE 6, VAL 6, HIS 4, THR 5, GLY 4 (residue and the binding sites it lines).

Found with

• 2KH · 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine
• MG · Magnesium ion
• ZN · Zinc ion
• IOD · Iodide ion
• SO4 · Sulfate ion