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Ligand · UJD

UJD · 1,3-dithiolane-2-carboxylic acid

UJD, 1,3-dithiolane-2-carboxylic acid (C4 H6 O2 S2, 150.2 g/mol), in the MolNFT structures on GenesisL1: bound in 3 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…

Component
UJD
Formula
C4 H6 O2 S2
Class
ligand
Structures
3
PDB entries
2

Binding sites

UJD in 3 structures; the first of them:

  • 7MY9 · Structure of proline utilization A with 1,3-dithiolane-2-carboxylate bound in the proline… · UJD A1301 · binds LYS265, ASP306, ARG367, ALA372, LEU449, TYR473, TYR485, ARG488 and 1 more
  • 8TD4 · Structure of PYCR1 complexed with NADH and 1,3-Dithiolane-2-carboxylic acid · UJD A403 · binds VAL231, SER232, SER233, GLY236, ALA237, THR238, ALA97, THR171 and 2 more
  • 7MY9 · Structure of proline utilization a with 1,3-dithiolane-2-carboxylate bound in the proline… · UJD A1301 · binds LYS265, ASP306, ALA372, LEU449, TYR473, TYR485, ARG488, ARG489

Residues it binds most

SER 5, ALA 9, ARG 4, GLY 5, THR 5, TYR 4, VAL 5, ASP 4, LEU 4, LYS 4 (residue and the binding sites it lines).

Found with

  • SO4 · Sulfate ion
  • FAD · Flavin-adenine dinucleotide
  • NAD · Nicotinamide-adenine-dinucleotide
  • MG · Magnesium ion
  • PEG · Di(hydroxyethyl)ether
  • PG4 · Tetraethylene glycol
  • PGE · Triethylene glycol
  • NAI · 1,4-dihydronicotinamide adenine dinucleotide

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