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Ligand · U2D

U2D · 6-O-decanoyl-alpha-D-glucopyranose

U2D, 6-O-decanoyl-alpha-D-glucopyranose (C16 H30 O7, 334.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…

Component
U2D
Formula
C16 H30 O7
Class
ligand
Structures
2
PDB entries
2

Binding sites

U2D in 2 structures; the first of them:

  • 6MNA · Crystal structure of lpqn involved in cell envelope biogenesis of mycobacterium… · U2D B1 · binds GLY153, SER154, GLN169, GLY171, GLY172, THR182, ALA184, LYS186 and 4 more
  • 7K7M · Crystal structure of a membrane protein · U2D C1 · binds GLN554, ILE557, PHE561, LEU564, ALA568

Residues it binds most

ALA 3, LEU 5, ASP 2, GLY 1, THR 3, GLN 2, PHE 2, SER 2, ARG 1, ILE 1 (residue and the binding sites it lines).

Found with

  • GLC · alpha-D-glucopyranose

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