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Ligand · TUM

TUM · Tunicamycin

TUM, Tunicamycin (C37 H60 N4 O16, 816.9 g/mol), in the MolNFT structures on GenesisL1: bound in 3 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
TUM
Formula
C37 H60 N4 O16
Class
ligand
Structures
3
PDB entries
2

Binding sites

TUM in 3 structures; the first of them:

  • 5JNQ · MraY tunicamycin complex · TUM A401 · binds LYS97, LYS111, ASN172, PHE173, ASP175, GLY176, LEU177, ASP178 and 11 more
  • 6BW5 · Human GPT (DPAGT1) in complex with tunicamycin · TUM A501 · binds GLN44, ASP45, LEU46, ASN47, GLU56, ASN119, TRP122, LYS125 and 18 more
  • 6BW5 · Human gpt (DPAGT1) in complex with tunicamycin · TUM A501 · binds GLN44, ASP45, LEU46, ASN47, GLU56, ASN119, TRP122, LYS125 and 18 more
  • 6BW6 · Human gpt (DPAGT1) H129 variant in complex with tunicamycin · TUM A501 · binds GLN44, ASP45, LEU46, ASN47, GLU56, TRP122, LYS125, LEU175 and 18 more

Residues it binds most

ASN 13, LEU 13, ILE 12, PHE 13, ASP 13, ARG 12, GLU 11, GLY 13, LYS 13, ALA 13 (residue and the binding sites it lines).

Found with

  • PGW · (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy) phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate
  • PLM · Palmitic acid
  • BOG · octyl beta-D-glucopyranoside

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