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Ligand · TRK

TRK · Tirandamycin D

TRK, Tirandamycin D (C22 H27 N O6, 401.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
TRK
Formula
C22 H27 N O6
Class
ligand
Structures
2
PDB entries
1

Binding sites

TRK in 2 structures; the first of them:

  • 2Y3R · Structure of the tirandamycin-bound FAD-dependent tirandamycin oxidase TamL in P21 space… · TRK B700 · binds TYR64, ALA121, CYS122, TYR264, VAL266, ILE327, ALA328, GLY329 and 12 more
  • 2Y3R · Structure of the tirandamycin-bound FAD-dependent tirandamycin oxidase taml in P21 space… · TRK B700 · binds TYR64, ALA121, CYS122, TYR264, VAL266, ILE327, ALA328, GLY329 and 12 more

Residues it binds most

ALA 4, ILE 4, TYR 4, VAL 4, GLY 4, THR 4, ASP 4, CYS 4, MET 4 (residue and the binding sites it lines).

Found with

  • FAD · Flavin-adenine dinucleotide
  • TIR · Tirandamycin E
  • MG · Magnesium ion
  • CL · Chloride ion
  • GOL · Glycerol

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