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Ligand · TOA

TOA · 3-ammonio-3-deoxy-alpha-D-glucopyranose

TOA, 3-ammonio-3-deoxy-alpha-D-glucopyranose (C6 H14 N O5 +1, 180.2 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the…

Component
TOA
Formula
C6 H14 N O5 +1
Class
sugar
Structures
4
PDB entries
2

Binding sites

TOA in 4 structures; the first of them:

  • 1TOB · Saccharide-RNA recognition in an aminoglycoside antibiotic-RNA aptamer complex, NMR, 7… · TOA A28 · binds A7, G8, G9, C15, A17, C18, A19
  • 2TOB · Solution structure of the tobramycin-RNA aptamer complex, NMR, 13 structures · TOA A100 · binds U7, G8, G9, U10, U11, G15, U16, A17 and 3 more
  • 1TOB · Saccharide-RNA recognition in an aminoglycoside antibiotic-RNA aptamer complex, NMR, 7… · TOA A28 · binds A7, G8, G9, C15, A17, C18, A19
  • 2TOB · Solution structure of the tobramycin-RNA aptamer complex, NMR, 13 structures · TOA A100 · binds U7, G8, G9, U10, U11, G15, U16, A17 and 3 more

Residues it binds most

G 4, A 4, U 2, C 2 (residue and the binding sites it lines).

Found with

  • TOC · 2,6-diammonio-2,3,6-trideoxy-alpha-D-glucopyranose
  • 2TB · 1,3-diamino-4,5,6-trihydroxy-cyclohexane
  • TOB · 1,3-diamino-5,6-dihydroxycyclohexane

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