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Ligand · TB2

TB2 · (4-tert-butylphenyl)acetaldehyde

TB2, (4-tert-butylphenyl)acetaldehyde (C12 H16 O, 176.3 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found…

Component
TB2
Formula
C12 H16 O
Class
ligand
Structures
4
PDB entries
2

Binding sites

TB2 in 4 structures; the first of them:

  • 3R1A · Closed crystal structure of cytochrome P450 2B4 covalently bound to the mechanism-based… · TB2 A501 · binds VAL104, PHE108, ILE114, PHE115, PHE206, ILE209, PHE297, ALA298 and 3 more
  • 3R1B · Open crystal structure of cytochrome P450 2B4 covalently bound to the mechanism-based… · TB2 A501 · binds ARG98, TRP121, SER294, ALA298, GLY299, THR302, ILE363, VAL367 and 3 more
  • 3R1A · Closed crystal structure of cytochrome P450 2B4 covalently bound to the mechanism-based… · TB2 A501 · binds VAL104, PHE108, ILE114, PHE115, PHE206, ILE209, PHE297, ALA298 and 3 more
  • 3R1B · Open crystal structure of cytochrome P450 2B4 covalently bound to the mechanism-based… · TB2 A501 · binds ARG98, TRP121, SER294, ALA298, GLY299, THR302, ILE363, VAL367 and 3 more

Residues it binds most

PHE 24, ILE 24, ALA 24, THR 24, VAL 20, GLU 16, SER 10, ARG 6, GLY 6, TRP 4 (residue and the binding sites it lines).

Found with

  • HEM · Protoporphyrin IX containing Fe
  • CM5 · 5-cyclohexyl-1-pentyl-beta-D-maltoside
  • FRU · beta-D-fructofuranose
  • GLC · alpha-D-glucopyranose

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