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Ligand · T46

T46 · dTDP-4-keto-6-deoxyglucose

T46, dTDP-4-keto-6-deoxyglucose (C16 H24 N2 O15 P2, 546.3 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…

Component
T46
Formula
C16 H24 N2 O15 P2
Class
ligand
Structures
4
PDB entries
2

Binding sites

T46 in 4 structures; the first of them:

  • 4O9G · Crystal structure of the H51N mutant of the 3,4-ketoisomerase QdtA from… · T46 A201 · binds ARG35, TYR37, ILE39, ARG48, GLY49, ASN51, HIS53, GLN58 and 9 more
  • 4ZAS · Crystal structure of sugar aminotransferase CalS13 from Micromonospora echinospora · T46 B402 · binds SER13, VAL15, PHE96, GLN176, ALA200, ILE201, LLP202, TRP306 and 9 more
  • 4O9G · Crystal structure of the H51N mutant of the 3,4-ketoisomerase qdta from… · T46 A201 · binds ARG35, TYR37, ILE39, ARG48, GLY49, ASN51, HIS53, GLN58 and 9 more
  • 4ZAS · Crystal structure of sugar aminotransferase CALS13 from micromonospora echinospora · T46 B402 · binds SER13, VAL15, PHE96, GLN176, ALA200, ILE201, LLP202, TRP306 and 9 more

Residues it binds most

ARG 6, TYR 4, ILE 6, LEU 6, GLN 6, GLY 6, HIS 6, ASN 4, MET 4, PRO 4 (residue and the binding sites it lines).

Found with

  • 4TD · (2S)-1-[3-[(2S)-2-oxidanylpropoxy]-2-[[(2S)-2-oxidanylpropoxy]methyl]-2-[[(2R)-2-oxidanylpropoxy]methyl]propoxy]propan-2-ol
  • TYD · Thymidine-5'-diphosphate
  • SO4 · Sulfate ion
  • EDO · 1,2-ethanediol

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