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Ligand · 4TD

4TD · (2S)-1-[3-[(2S)-2-oxidanylpropoxy]-2-[[(2S)-2-oxidanylpropoxy]methyl]-2-[[(2R)-2-oxidanylpropoxy]methyl]propoxy]propan-2-ol

4TD, (2S)-1-[3-[(2S)-2-oxidanylpropoxy]-2-[[(2S)-2-oxidanylpropoxy]methyl]-2-[[(2R)-2-oxidanylpropoxy]methyl]propoxy]propan-2-ol (C17 H36 O8, 368.5 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every…

Component
4TD
Formula
C17 H36 O8
Class
ligand
Structures
4
PDB entries
2

Binding sites

4TD in 4 structures; the first of them:

  • 4O9E · Crystal structure of QdtA, a sugar 3,4-ketoisemerase from Thermoanaerobacterium… · 4TD B202 · binds TYR50, LYS72, TRP96, GLU98, TYR125
  • 4O9G · Crystal structure of the H51N mutant of the 3,4-ketoisomerase QdtA from… · 4TD B203 · binds TYR50, LYS72, TRP96, GLU98, TYR125
  • 4O9E · Crystal structure of qdta, a sugar 3,4-ketoisemerase from thermoanaerobacterium… · 4TD B202 · binds TYR50, LYS72, TRP96, GLU98, TYR125
  • 4O9G · Crystal structure of the H51N mutant of the 3,4-ketoisomerase qdta from… · 4TD B203 · binds TYR50, LYS72, TRP96, GLU98, TYR125

Residues it binds most

TYR 4, GLU 4, LYS 4, TRP 4 (residue and the binding sites it lines).

Found with

  • T46 · dTDP-4-keto-6-deoxyglucose
  • TDR · Thymine
  • TYD · Thymidine-5'-diphosphate
  • EDO · 1,2-ethanediol

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