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Ligand · SYD

SYD · [(5-phenylpyridin-2-yl)methyl]phosphonic acid

SYD, [(5-phenylpyridin-2-yl)methyl]phosphonic acid (C12 H12 N O3 P, 249.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and…

Component
SYD
Formula
C12 H12 N O3 P
Class
ligand
Structures
2
PDB entries
1

Binding sites

SYD in 2 structures; the first of them:

  • 3ANM · Crystal structure of 1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXR) complexed with… · SYD A800 · binds GLU151, THR183, GLY184, SER185, GLY186, GLY187, HIS208, ASN210 and 9 more
  • 3ANM · Crystal structure of 1-deoxy-D-xylulose 5-phosphate reductoisomerase (dxr) complexed with… · SYD A800 · binds GLU151, THR183, GLY184, SER185, GLY186, GLY187, HIS208, ASN210 and 9 more

Residues it binds most

SER 4, GLY 4, ASN 4, PRO 4, GLN 4, GLU 4, HIS 4, LYS 4, MET 4, THR 4 (residue and the binding sites it lines).

Found with

  • NDP · Nadph dihydro-nicotinamide-adenine-dinucleotide phosphate

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