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Ligand · SSO

SSO · 1,4-dideoxy-1,4-[[2S,3S)-2,4-dihydroxy-3-(sulfoxy)butyl]episulfoniumylidene]-D-arabinitol inner salt

SSO, 1,4-dideoxy-1,4-[[2S,3S)-2,4-dihydroxy-3-(sulfoxy)butyl]episulfoniumylidene]-D-arabinitol inner salt (C9 H18 O9 S2 -2, 334.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its…

Component
SSO
Formula
C9 H18 O9 S2 -2
Class
ligand
Structures
2
PDB entries
1

Binding sites

SSO in 2 structures; the first of them:

  • 1TQS · Golgi alpha-Mannosidase II In Complex With Salacinol · SSO A1201 · binds HIS90, ASP92, TRP95, ASP204, PHE206, ARG228, TYR269, ASP341 and 7 more
  • 1TQS · Golgi alpha-mannosidase II in complex with salacinol · SSO A1201 · binds HIS90, ASP92, TRP95, ASP204, PHE206, ARG228, TYR269, ASP341 and 7 more

Residues it binds most

ASP 2, ARG 2, HIS 2, TRP 2, TYR 2, GLY 2, PHE 2, THR 2 (residue and the binding sites it lines).

Found with

  • ZN · Zinc ion
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • MRD · (4R)-2-methylpentane-2,4-diol

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