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Ligand · SP1

SP1 · 6-(6-amino-purin-9-yl)-2-thioxo-tetrahydro-2-furo[3,2-d][1,3,2]dioxaphosphinine-2,7-diol

SP1, 6-(6-amino-purin-9-yl)-2-thioxo-tetrahydro-2-furo[3,2-d][1,3,2]dioxaphosphinine-2,7-diol (C10 H12 N5 O5 P S, 345.3 g/mol), in the MolNFT structures on GenesisL1: bound in 6 records (3 PDB entries). Every binding site with its residues…

Component
SP1
Formula
C10 H12 N5 O5 P S
Class
ligand
Structures
6
PDB entries
3

Binding sites

SP1 in 6 structures; the first of them:

  • 1NE6 · Crystal structure of Sp-cAMP binding R1a subunit of cAMP-dependent protein kinase · SP1 A401 · binds ILE163, VAL182, VAL184, ALA189, THR190, PHE198, GLY199, GLU200 and 8 more
  • 3CF6 · Structure of Epac2 in complex with cyclic-AMP and Rap · SP1 E2 · binds PHE367, VAL386, ILE388, VAL394, CYS395, PHE403, GLY404, LYS405 and 11 more
  • 4R8H · The role of protein-ligand contacts in allosteric regulation of the Escherichia coli… · SP1 A301 · binds ILE31, ALA37, VAL50, LEU62, SER63, LEU65, ILE71, GLY72 and 15 more
  • 1NE6 · Crystal structure of sp-camp binding R1A subunit of camp- dependent protein kinase · SP1 A401 · binds ILE163, VAL182, VAL184, ALA189, THR190, PHE198, GLY199, GLU200 and 8 more
  • 3CF6 · Structure of EPAC2 in complex with cyclic-AMP and rap · SP1 E2 · binds PHE367, VAL386, ILE388, VAL394, CYS395, PHE403, GLY404, LYS405 and 11 more
  • 4R8H · The role of protein-ligand contacts in allosteric regulation of the escherichia COLI… · SP1 A301 · binds ILE31, ALA37, VAL50, LEU62, SER63, LEU65, ILE71, GLY72 and 15 more

Residues it binds most

VAL 12, ALA 12, GLY 16, LEU 10, SER 12, GLU 14, ARG 14, GLN 12, ILE 12, LYS 6 (residue and the binding sites it lines).

Found with

  • SO4 · Sulfate ion
  • GOL · Glycerol

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