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Ligand · SNG

SNG · methyl 2-acetamido-2-deoxy-1-seleno-beta-D-glucopyranoside

SNG, methyl 2-acetamido-2-deoxy-1-seleno-beta-D-glucopyranoside (C9 H17 N O5 Se, 298.2 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it…

Component
SNG
Formula
C9 H17 N O5 Se
Class
sugar
Structures
4
PDB entries
2

Binding sites

SNG in 4 structures; the first of them:

  • 1O9V · F17-aG lectin domain from Escherichia coli in complex with a selenium carbohydrate… · SNG A1177 · binds ALA43, ASN44, ASP88, THR89, PHE106, TRP109, SER117, THR118 and 2 more
  • 2BWM · 1.8A CRYSTAL STRUCTURE OF of Psathyrella velutina LECTIN IN COMPLEX WITH METHYL… · SNG A1403 · binds ASN46, GLY52, GLY53, TRP54, HIS59, GLY78, GLU79, ASN80 and 1 more
  • 1O9V · F17-ag lectin domain from escherichia COLI in complex with a selenium carbohydrate… · SNG A1177 · binds ALA43, ASN44, ASP88, THR89, PHE106, TRP109, SER117, THR118 and 2 more
  • 2BWM · 1.8A crystal structure of of psathyrella velutina lectin in complex with methyl… · SNG A1403 · binds ASN46, GLY52, GLY53, TRP54, HIS59, GLY78, GLU79, ASN80 and 1 more

Residues it binds most

GLY 12, TRP 12, ASN 10, HIS 10, ASP 6, TYR 8, ALA 4, GLN 4, GLU 4, SER 4 (residue and the binding sites it lines).

Found with

  • CA · Calcium ion
  • SO4 · Sulfate ion
  • GOL · Glycerol

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