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Ligand · SEL

SEL · 2-amino-1,3-propanediol

SEL, 2-amino-1,3-propanediol (C3 H9 N O2, 91.1 g/mol), in the MolNFT structures on GenesisL1: bound in 3 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
SEL
Formula
C3 H9 N O2
Class
ligand
Structures
3
PDB entries
2

Binding sites

SEL in 3 structures; the first of them:

  • 4LW6 · Crystal structure of catalytic domain of Drosophila beta1,4galactosyltransferase 7… · SEL A405 · binds ARG123, ASP145, TYR177, GLY184, GLY185, TRP207, GLY208, LEU209 and 2 more
  • 1D5X · X-ray crystal structure of HLA-DR4 complexed with dipeptide mimetic and seb · SEL D808 · binds GLU11, ASN62, VAL65, ASP66, VAL11, HIS13, TYR30, HAQ807
  • 4LW6 · Crystal structure of catalytic domain of drosophila BETA1, 4GALACTOSYLTRANSFERASE 7… · SEL A405 · binds ARG123, ASP145, TYR177, GLY184, GLY185, TRP207, GLY208, LEU209 and 2 more

Residues it binds most

GLY 2, ASP 3, GLU 3, TYR 3, ARG 2, LEU 2, TRP 2, VAL 1, ASN 1, HAQ 1 (residue and the binding sites it lines).

Found with

  • UDP · Uridine-5'-diphosphate
  • MN · Manganese (II) ion
  • XYP · beta-D-xylopyranose
  • ACE · Acetyl group

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