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Ligand · SEK

SEK · Selenocyanate ion

SEK, Selenocyanate ion (C N Se -1, 105.0 g/mol), in the MolNFT structures on GenesisL1: bound in 5 records (3 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
SEK
Formula
C N Se -1
Class
ligand
Structures
5
PDB entries
3

Binding sites

SEK in 5 structures; the first of them:

  • 2H2P · Crystal structure of CLC-ec1 in complex with Fab fragment in SeCN- · SEK A466 · binds GLY106, SER107, PHE348, ILE448
  • 2H2S · Crystal Structure of E148A mutant of CLC-ec1 in SeCN- · SEK A466 · binds GLY106, SER107, GLN277, PHE348, ILE448
  • 8YOU · The pmTcDH complex structure with an inhibitor SeCN · SEK A601 · binds HIS100, HIS101, HIS171, PRO256, ASP279, HIS346, GLN347, PHE401 and 3 more
  • 2H2P · Crystal structure of clc-EC1 in complex with Fab fragment in secn- · SEK A466 · binds GLY106, SER107, PHE348, ILE448
  • 2H2S · Crystal structure of E148A mutant of clc-EC1 in secn- · SEK A466 · binds GLY106, SER107, GLN277, PHE348, ILE448

Residues it binds most

ALA 18, LEU 12, PHE 13, ASN 10, GLY 8, ILE 10, PRO 9, SER 8, GLN 7, HIS 1 (residue and the binding sites it lines).

Found with

  • CU · Copper (II) ion
  • NA · Sodium ion
  • SE · Selenium atom
  • GOL · Glycerol

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