Ligand · SDS
SDS · Dodecyl sulfate
SDS, Dodecyl sulfate (C12 H26 O4 S, 266.4 g/mol), in the MolNFT structures on GenesisL1: bound in 23 records (12 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.
- Component
- SDS
- Formula
- C12 H26 O4 S
- Class
- additive
- Structures
- 23
- PDB entries
- 12
Binding sites
SDS in 23 structures; the first of them:
- 1H0J · Structural Basis of the Membrane-induced Cardiotoxin A3 Oligomerization · SDS A1061 · binds PRO30, LYS31, LYS44, SER46
- 3B6L · Crystal structure of lysozyme folded in SDS and 2-methyl-2,4-pentanediol · SDS A2300 · binds SER2060, CYS2064, ASN2065, ASP2066, GLY2067, ARG2068, THR2069, PRO2070 and 5 more
- 3GP6 · Crystal structure of PagP in SDS/MPD · SDS A163 · binds TYR26, TRP66, TYR70, MET72, PHE74, GLU82, ILE84, THR108 and 12 more
- 3QQT · Amphiphilic nanotubes in the crystal structure of a biosurfactant protein hydrophobin… · SDS B72 · binds PRO4, LEU7, PHE8, GLN65, PRO4, THR5, GLY6, LEU7 and 2 more
- 3U90 · apoferritin: complex with SDS · SDS A175 · binds LEU24, SER27, TYR28, LEU31, ALA55, GLU56, ARG59, GLU63 and 1 more
- 4D87 · Crystal Structure of Tyrosinase from Bacillus megaterium in complex with SDS · SDS A402 · binds GLU158, ARG209
- 4GNY · Bovine beta-lactoglobulin complex with dodecyl sulfate · SDS A201 · binds PRO38, LEU39, VAL41, VAL43, LEU46, LEU54, ILE56, LEU58 and 11 more
- 4IB8 · Bovine beta-lactoglobulin (isoform A) in complex with dodecyl sulphate (SDS) · SDS A201 · binds PRO38, LEU39, VAL41, VAL43, LEU46, LEU54, ILE56, LEU58 and 9 more
- 4IBA · Bovine beta-lactoglobulin (isoform B) in complex with dodecyl sulphate (SDS) · SDS A201 · binds PRO38, VAL41, VAL43, LEU46, LEU54, ILE56, LYS60, LYS69 and 7 more
- 4QIP · Crystal Structure of Major Birch Pollen Allergen Bet v 1 isoform a in complex with Sodium… · SDS A201 · binds GLN36, ALA37, PHE58, PHE62, PRO63, PHE64, ALA135, GLU138 and 2 more
- 7KOT · Energetic and structural effects of the Tanford transition on the ligand recognition of… · SDS A201 · binds PRO38, LEU39, VAL41, LEU46, LEU54, ILE56, LEU58, LYS60 and 9 more
- 7KP5 · Energetic and structural effects of the Tanford transition on the ligand recognition of… · SDS AA1201 · binds PRO38, LEU39, VAL41, VAL43, LEU46, ILE56, LEU58, ILE84 and 9 more
- 1H0J · Structural basis of the membrane-induced cardiotoxin A3 oligomerization · SDS A1061 · binds PRO30, LYS31, LYS44, SER46
- 3B6L · Crystal structure of lysozyme folded in sds and 2-methyl-2,4- pentanediol · SDS A2300 · binds SER2060, CYS2064, ASN2065, ASP2066, GLY2067, ARG2068, THR2069, PRO2070 and 5 more
Residues it binds most
LEU 40, VAL 34, LYS 32, ILE 17, PRO 33, PHE 25, ALA 19, SER 15, THR 14, TYR 14 (residue and the binding sites it lines).
Found with
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