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Ligand · SBY

SBY · 3-[dodecyl(dimethyl)ammonio]propane-1-sulfonate

SBY, 3-[dodecyl(dimethyl)ammonio]propane-1-sulfonate (C17 H37 N O3 S, 335.6 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most…

Component
SBY
Formula
C17 H37 N O3 S
Class
ligand
Structures
4
PDB entries
2

Binding sites

SBY in 4 structures; the first of them:

  • 2WPN · Structure of the oxidised, as-isolated NiFeSe hydrogenase from D. vulgaris Hildenborough · SBY A1288 · binds TRP12, SER22, LEU25, LEU26, ILE33, LEU37, LEU43, HIS46 and 3 more
  • 3ZE6 · 3D structure of the Ni-Fe-Se hydrogenase from D. vulgaris Hildenborough in the… · SBY A1285 · binds TRP12, SER22, LEU25, LEU26, SER28, ILE33, LEU37, LEU43 and 4 more
  • 2WPN · Structure of the oxidised, as-isolated nifese hydrogenase from D. vulgaris hildenborough · SBY A1288 · binds TRP12, SER22, LEU25, LEU26, ILE33, LEU37, LEU43, HIS46 and 3 more
  • 3ZE6 · 3D structure of the ni-fe-se hydrogenase from D. vulgaris hildenborough in the… · SBY A1285 · binds TRP12, SER22, LEU25, LEU26, SER28, ILE33, LEU37, LEU43 and 4 more

Residues it binds most

LEU 18, VAL 18, ILE 16, PHE 14, PRO 12, TYR 10, ALA 8, SER 4, GLN 4, GLU 4 (residue and the binding sites it lines).

Found with

  • FCO · Carbonmonoxide-(dicyano) iron
  • FSX · Bis-(mu-2-oxo),[(mu-3--sulfido)-bis(mu-2--sulfido)-tris(cys-S)-tri-iron] (aqua)(glu-o)iron(ii)
  • SF4 · Iron/sulfur cluster
  • FE2 · Fe (II) ion
  • NI · Nickel (II) ion
  • CL · Chloride ion
  • GOL · Glycerol

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