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Ligand · RPL

RPL · (C8-S)-hydantocidin 5'-phosphate

RPL, (C8-S)-hydantocidin 5'-phosphate (C13 H22 N3 O13 P, 459.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…

Component
RPL
Formula
C13 H22 N3 O13 P
Class
ligand
Structures
2
PDB entries
1

Binding sites

RPL in 2 structures; the first of them:

  • 1QF5 · Design, synthesis, and X-ray crystal structure of an enzyme bound bisubstrate hybrid… · RPL A435 · binds TRP11, ASP13, ASN38, ALA39, GLY40, ILE126, GLY127, THR128 and 17 more
  • 1QF5 · Design, synthesis, and X-ray crystal structure of an enzyme bound bisubstrate hybrid… · RPL A435 · binds TRP11, ASP13, ASN38, ALA39, GLY40, ILE126, GLY127, THR128 and 17 more

Residues it binds most

GLY 2, THR 2, ALA 2, ARG 2, ILE 2, VAL 2, ASN 2, ASP 2, GLN 2, LEU 2 (residue and the binding sites it lines).

Found with

  • GDP · Guanosine-5'-diphosphate
  • MG · Magnesium ion
  • PO4 · Phosphate ion

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