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Ligand · RND

RND · N-[1-(1H-indol-3-ylmethyl)piperidin-4-yl]-L-tryptophanamide

RND, N-[1-(1H-indol-3-ylmethyl)piperidin-4-yl]-L-tryptophanamide (C25 H29 N5 O, 415.5 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds…

Component
RND
Formula
C25 H29 N5 O
Class
ligand
Structures
2
PDB entries
1

Binding sites

RND in 2 structures; the first of them:

  • 4NYM · Approach for Targeting Ras with Small Molecules that Activate SOS-Mediated Nucleotide… · RND S1101 · binds MET878, ASN879, TYR884, ASP887, PHE890, LYS898, LEU901, GLU902 and 1 more
  • 4NYM · Approach for targeting RAS with small molecules that activate sos- mediated nucleotide… · RND S1101 · binds MET878, ASN879, TYR884, ASP887, PHE890, LYS898, LEU901, GLU902 and 1 more

Residues it binds most

ASN 2, ASP 2, GLU 2, HIS 2, LEU 2, LYS 2, MET 2, PHE 2, TYR 2 (residue and the binding sites it lines).

Found with

  • GNP · Phosphoaminophosphonic acid-guanylate ester
  • MG · Magnesium ion

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