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Ligand · RMF

RMF · ~{N}-[[5,6-bis(chloranyl)-1~{H}-benzimidazol-2-yl]methyl]-9-(1-methylpyrazol-4-yl)-2-morpholin-4-yl-purin-6-amine

RMF, ~{N}-[[5,6-bis(chloranyl)-1~{H}-benzimidazol-2-yl]methyl]-9-(1-methylpyrazol-4-yl)-2-morpholin-4-yl-purin-6-amine (C21 H20 Cl2 N10 O, 499.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (2 PDB entries). Every…

Component
RMF
Formula
C21 H20 Cl2 N10 O
Class
ligand
Structures
2
PDB entries
2

Binding sites

RMF in 2 structures; the first of them:

  • 8BU5 · Structure of DDB1 bound to SR-4835-engaged CDK12-cyclin K · RMF B1101 · binds ASN907, ARG928, ARG947, ILE733, GLY734, GLU735, VAL741, ALA754 and 13 more
  • 9FMR · Structure of DDB1/Cdk12/Cyclin K with molecular glue SR-4835 · RMF B1101 · binds ASN907, ARG928, ARG947, ILE732, ILE733, GLY734, GLU735, GLY736 and 15 more

Residues it binds most

ASP 6, GLU 6, ALA 6, ARG 6, VAL 6, ILE 6, MET 6, PHE 6, GLY 6, ASN 6 (residue and the binding sites it lines).

Found with

  • SO4 · Sulfate ion
  • CIT · Citric acid

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