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Ligand · RBV

RBV · 1-(beta-D-ribofuranosyl)-1H-1,2,4-triazole-3-carboxamide

RBV, 1-(beta-D-ribofuranosyl)-1H-1,2,4-triazole-3-carboxamide (C8 H12 N4 O5, 244.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds…

Component
RBV
Formula
C8 H12 N4 O5
Class
ligand
Structures
2
PDB entries
2

Binding sites

RBV in 2 structures; the first of them:

  • 5AXD · Crystal structure of mouse SAHH complexed with ribavirin · RBV A502 · binds HIS55, THR57, GLU59, THR60, ASP131, GLU156, THR157, LYS186 and 9 more
  • 8TZ1 · Cryo-EM structure of bovine concentrative nucleoside transporter 3 in complex with… · RBV A801 · binds GLY346, GLN347, THR348, GLU349, ALA378, SER380, VAL381, TYR385 and 8 more

Residues it binds most

GLU 5, THR 5, ASN 5, PHE 5, LEU 5, SER 3, GLY 5, ASP 2, HIS 2, MET 2 (residue and the binding sites it lines).

Found with

  • LBN · 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine
  • NAD · Nicotinamide-adenine-dinucleotide
  • NA · Sodium ion

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