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Ligand · RBH

RBH · ~{N}-[(2~{S},3~{S},4~{S},5~{R})-2-(hydroxymethyl)-4,5,6-tris(oxidanyl)oxan-3-yl]-2-oxidanyl-ethanamide

RBH, ~{N}-[(2~{S},3~{S},4~{S},5~{R})-2-(hydroxymethyl)-4,5,6-tris(oxidanyl)oxan-3-yl]-2-oxidanyl-ethanamide (C14 H27 N4 O9 +1, 395.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (2 PDB entries). Every binding site with…

Component
RBH
Formula
C14 H27 N4 O9 +1
Class
ligand
Structures
2
PDB entries
2

Binding sites

RBH in 2 structures; the first of them:

  • 8BQA · CjCel5B endo-glucanase bound to CB665 covalent inhibitor · RBH AAA401 · binds PHE27, TRP28, TRP254, LYS259, GLU261
  • 8OZ1 · CjCel5D endo-xyloglucanase bounc to CB665 covalent inhibitor · RBH A802 · binds ASN60, TRP71, TRP360, ASN362

Residues it binds most

TRP 2, ASN 1, GLU 1, LYS 1, PHE 1 (residue and the binding sites it lines).

Found with

  • YLL · (1R,2S,3S,4S,5R,6R)-6-(hydroxymethyl)cyclohexane-1,2,3,4,5-pentol
  • XYS · alpha-D-xylopyranose
  • BO3 · Boric acid

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