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Ligand · R7K

R7K · ~{N}-[[2,4-bis(fluoranyl)phenyl]methyl]-5-(hydroxymethyl)-1,4-bis(oxidanyl)-2-oxidanylidene-1,8-naphthyridine-3-carboxamide

R7K, ~{N}-[[2,4-bis(fluoranyl)phenyl]methyl]-5-(hydroxymethyl)-1,4-bis(oxidanyl)-2-oxidanylidene-1,8-naphthyridine-3-carboxamide (C17 H13 F2 N3 O5, 377.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry).…

Component
R7K
Formula
C17 H13 F2 N3 O5
Class
ligand
Structures
2
PDB entries
1

Binding sites

R7K in 2 structures; the first of them:

  • 7ADU · Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with magnesium… · R7K A403 · binds ASP128, TYR129, ASP185, PRO214, GLN215, GLU221, DG4, DC16 and 1 more
  • 7ADU · Crystal structure of the prototype foamy virus (pfv) intasome in complex with magnesium… · R7K A403 · binds ASP128, TYR129, ASP185, PRO214, GLN215, GLU221, DG4, DC16 and 1 more

Residues it binds most

ASP 2, DA 2, DC 2, DG 2, GLN 2, GLU 2, PRO 2, TYR 2 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • ZN · Zinc ion
  • SO4 · Sulfate ion
  • GOL · Glycerol
  • MES · 2-(N-morpholino)-ethanesulfonic acid

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