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Ligand · R52

R52 · 5-O-phosphono-D-ribose

R52, 5-O-phosphono-D-ribose (C5 H11 O8 P, 230.1 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
R52
Formula
C5 H11 O8 P
Class
ligand
Structures
4
PDB entries
2

Binding sites

R52 in 4 structures; the first of them:

  • 2VVP · Crystal structure of Mycobacterium tuberculosis ribose-5-phosphate isomerase B in complex… · R52 A200 · binds ASP11, HIS12, ALA13, TYR46, GLY69, GLY70, SER71, GLY72 and 9 more
  • 3K7S · Complex of Trypanosoma cruzi ribose 5-phosphate isomerase type B with ribose 5-phosphate · R52 A160 · binds ASP10, HIS11, PRO12, TYR46, CYS69, GLY70, SER71, ILE73 and 6 more
  • 2VVP · Crystal structure of mycobacterium tuberculosis ribose-5- phosphate isomerase B in… · R52 A200 · binds ASP11, HIS12, ALA13, TYR46, GLY69, GLY70, SER71, GLY72 and 9 more
  • 3K7S · Complex of trypanosoma cruzi ribose 5-phosphate isomerase type B with ribose 5-phosphate · R52 A160 · binds ASP10, HIS11, PRO12, TYR46, CYS69, GLY70, SER71, ILE73 and 6 more

Residues it binds most

GLY 18, ARG 18, HIS 18, ASN 18, ASP 18, SER 18, TYR 18, ALA 10, GLU 10, CYS 8 (residue and the binding sites it lines).

Found with

  • 5RP · Ribulose-5-phosphate

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