GL1X · GenesisL1 explorer

Ligand · R2G

R2G · 2,5-anhydro-4-deoxy-D-erythro-pent-4-enitol

R2G, 2,5-anhydro-4-deoxy-D-erythro-pent-4-enitol (C5 H8 O3, 116.1 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the…

Component
R2G
Formula
C5 H8 O3
Class
sugar
Structures
2
PDB entries
1

Binding sites

R2G in 2 structures; the first of them:

  • 3KVR · Trapping of an oxocarbenium ion intermediate in UP crystals · R2G A311 · binds MET109, GLY110, ARG137, THR140, PHE212, GLU247, MET248, GLU249 and 4 more
  • 3KVR · Trapping of an oxocarbenium ion intermediate in up crystals · R2G A311 · binds MET109, GLY110, ARG137, THR140, PHE212, GLU247, MET248, GLU249 and 4 more

Residues it binds most

ARG 4, GLU 4, MET 4, GLY 4, HIS 4, ILE 4, PHE 4, THR 4, TYR 4 (residue and the binding sites it lines).

Found with

  • URF · 5-fluorouracil
  • SO4 · Sulfate ion

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.