GL1X · GenesisL1 explorer

Ligand · QEO

QEO · 2-amino-5-({[(1S,4S,5R)-4,5-dihydroxycyclopent-2-en-1-yl]amino}methyl)-7-beta-D-ribofuranosyl-3,7-dihydro-4H-pyrrolo[2,3-d]pyrimidin-4-one

QEO, 2-amino-5-({[(1S,4S,5R)-4,5-dihydroxycyclopent-2-en-1-yl]amino}methyl)-7-beta-D-ribofuranosyl-3,7-dihydro-4H-pyrrolo[2,3-d]pyrimidin-4-one (C17 H23 N5 O7, 409.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (2 PDB…

Component
QEO
Formula
C17 H23 N5 O7
Class
ligand
Structures
2
PDB entries
2

Binding sites

QEO in 2 structures; the first of them:

  • 7U1O · Crystal structure of queuine salvage enzyme DUF2419 complexed with queuosine · QEO A400 · binds PRO46, TRP48, HIS53, ASN72, PHE73, CYS74, PHE75, TYR93 and 12 more
  • 7U5A · Crystal structure of queuine salvage enzyme DUF2419 mutant K199C, complexed with queuosine · QEO A400 · binds PRO46, THR47, TRP48, ASN49, ASN72, PHE73, PHE75, TYR93 and 10 more

Residues it binds most

TRP 4, ASP 4, PHE 4, TYR 4, ASN 4, CYS 4, ILE 4, LYS 2, PRO 4, VAL 4 (residue and the binding sites it lines).

Found with

  • MLI · Malonate ion
  • PEG · Di(hydroxyethyl)ether

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