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Ligand · PPF

PPF · Phosphonoformic acid

PPF, Phosphonoformic acid (C H3 O5 P, 126.0 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
PPF
Formula
C H3 O5 P
Class
ligand
Structures
2
PDB entries
2

Binding sites

PPF in 2 structures; the first of them:

  • 5HP1 · STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE In COMPLEX WITH A DNA aptamer and FOSCARNET, a… · PPF A602 · binds LYS65, ARG72, ASP110, VAL111, GLY112, ASP113, ALA114, ASP185 and 1 more
  • 8EXX · Herpes simplex virus 1 polymerase holoenzyme bound to DNA and foscarnet… · PPF A1304 · binds ASP717, PHE718, ALA719, SER720, ARG785, ARG789, LYS811, ASP888 and 3 more

Residues it binds most

ASP 3, ARG 3, LYS 3, ALA 3, ATM 2, GLU 1, GLY 2, VAL 2, DOC 1, PHE 1 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • FRU · beta-D-fructofuranose
  • GLC · alpha-D-glucopyranose
  • SO4 · Sulfate ion
  • GOL · Glycerol

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