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Ligand · PBQ

PBQ · Pentabromopseudilin

PBQ, Pentabromopseudilin (C10 H4 Br5 N O, 553.7 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
PBQ
Formula
C10 H4 Br5 N O
Class
ligand
Structures
4
PDB entries
2

Binding sites

PBQ in 4 structures; the first of them:

  • 2JHR · Crystal structure of myosin-2 motor domain in complex with ADP- metavanadate and… · PBQ A1780 · binds LYS265, ALA420, LYS423, ALA424, GLY427, ARG428, LEU431, ASP590 and 6 more
  • 4NAK · Arabidopsis thaliana IspD in complex with pentabromo-pseudilin · PBQ A401 · binds ARG157, GLN158, VAL161, ILE177, ALA202, ALA203, VAL204, MET234 and 9 more
  • 2JHR · Crystal structure of myosin-2 motor domain in complex with ADP- metavanadate and… · PBQ A1780 · binds LYS265, ALA420, LYS423, ALA424, GLY427, ARG428, LEU431, ASP590 and 6 more
  • 4NAK · Arabidopsis thaliana ispd in complex with pentabromo-pseudilin · PBQ A401 · binds ARG157, GLN158, VAL161, ILE177, ALA202, ALA203, VAL204, MET234 and 9 more

Residues it binds most

ALA 4, VAL 2, ILE 4, ARG 4, LEU 4, GLN 2, LYS 2, SER 4, ASP 2, GLY 2 (residue and the binding sites it lines).

Found with

  • AD9 · Adp metavanadate
  • CD · Cadmium ion
  • K · Potassium ion
  • MG · Magnesium ion
  • DTT · 2,3-dihydroxy-1,4-dithiobutane

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