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Ligand · PB2

PB2 · 1-(biphenyl-4-ylmethyl)-1H-imidazole

PB2, 1-(biphenyl-4-ylmethyl)-1H-imidazole (C16 H14 N2, 234.3 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…

Component
PB2
Formula
C16 H14 N2
Class
ligand
Structures
4
PDB entries
2

Binding sites

PB2 in 4 structures; the first of them:

  • 3G5N · Triple ligand occupancy crystal structure of cytochrome P450 2B4 in complex with the… · PB2 A501 · binds ALA298, GLY299, THR302, ILE363, GLY366, VAL367, PRO368, CYS436 and 8 more
  • 3G93 · Single ligand occupancy crystal structure of cytochrome P450 2B4 in complex with the… · PB2 A501 · binds ALA298, GLY299, THR302, ILE363, GLY366, VAL367, PRO368, CYS436 and 7 more
  • 3G5N · Triple ligand occupancy crystal structure of cytochrome P450 2B4 in complex with the… · PB2 A501 · binds ALA298, GLY299, THR302, ILE363, GLY366, VAL367, PRO368, CYS436 and 8 more
  • 3G93 · Single ligand occupancy crystal structure of cytochrome P450 2B4 in complex with the… · PB2 A501 · binds ALA298, GLY299, THR302, ILE363, GLY366, VAL367, PRO368, CYS436 and 7 more

Residues it binds most

PHE 28, LEU 28, GLY 24, PRO 24, VAL 24, ILE 24, THR 24, SER 12, GLU 20, LYS 20 (residue and the binding sites it lines).

Found with

  • HEM · Protoporphyrin IX containing Fe
  • CM5 · 5-cyclohexyl-1-pentyl-beta-D-maltoside

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