GL1X · GenesisL1 explorer

Ligand · P2D

P2D · pentane-2,4-dione

P2D, pentane-2,4-dione (C5 H8 O2, 100.1 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
P2D
Formula
C5 H8 O2
Class
ligand
Structures
4
PDB entries
2

Binding sites

P2D in 4 structures; the first of them:

  • 3WL7 · The complex structure of pOPH S172C with ligand, ACA · P2D A901 · binds SER66, ASN120, TRP121, OCS172, GLU198, TYR200, TRP255, CYS257 and 3 more
  • 4S1F · Fructose-6-phosphate aldolase A from E.coli soaked in acetylacetone · P2D B301 · binds ASP6, THR26, THR27, ASN28, ILE31, LYS85, LEU107, THR109 and 3 more
  • 3WL7 · The complex structure of poph S172C with ligand, aca · P2D A901 · binds SER66, ASN120, TRP121, OCS172, GLU198, TYR200, TRP255, CYS257 and 3 more
  • 4S1F · Fructose-6-phosphate aldolase a from E.COLI soaked in acetylacetone · P2D B301 · binds ASP6, THR26, THR27, ASN28, ILE31, LYS85, LEU107, THR109 and 3 more

Residues it binds most

THR 10, ALA 12, TYR 12, ASN 12, ASP 10, LYS 10, ILE 8, LEU 6, SER 6, CYS 2 (residue and the binding sites it lines).

Found with

  • CIT · Citric acid

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.