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Ligand · ONT

ONT · (2~{S})-1-(2-methoxyethoxy)propan-2-amine

ONT, (2~{S})-1-(2-methoxyethoxy)propan-2-amine (C6 H15 N O2, 133.2 g/mol), in the MolNFT structures on GenesisL1: bound in 10 records (6 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the…

Component
ONT
Formula
C6 H15 N O2
Class
ligand
Structures
10
PDB entries
6

Binding sites

ONT in 10 structures; the first of them:

  • 6YE0 · E.coli's Putrescine receptor PotF complexed with Putrescine · ONT A402 · binds MET73, LEU72, MET73, ALA74, GLY75, ALA95, GLY96, VAL97
  • 6YE6 · E.coli's Putrescine receptor PotF complexed with Agmatine · ONT A401 · binds LEU119, TRP135, PHE277, ARG342, LEU345
  • 6YE8 · E.coli's Putrescine receptor PotF complexed with Spermidine · ONT A403 · binds ASP113, GLU115, LEU116, LEU119, TRP135, PHE277, ARG342, LEU345
  • 7OYW · E.coli's putrescine receptor variant PotF/D (4JDF) with mutations E39D F88L S247D in… · ONT A402 · binds PRO338, ALA339, ASP340, ARG342
  • 8AT0 · PotF with mutation D247K · ONT A401 · binds ASP113, GLU115, LEU116, LEU119, TRP135, ALA275, PHE277, ARG342 and 1 more
  • 6YE0 · E.COLI'S putrescine receptor potf complexed with putrescine · ONT A402 · binds MET73, MET73, GLY75, ALA95, GLY96
  • 6YE6 · E.COLI'S putrescine receptor potf complexed with agmatine · ONT A401 · binds LEU119, TRP135, PHE277, ARG342, LEU345
  • 6YE8 · E.COLI'S putrescine receptor potf complexed with spermidine · ONT A403 · binds LEU116, LEU119, TRP135, ARG342
  • 7OYW · E.COLI'S putrescine receptor variant POTF/D (4JDF) with mutations E39D F88L S247D in… · ONT A402 · binds PRO338, ALA339, ARG342
  • 7OYX · E.COLI'S putrescine receptor variant POTF/D (4JDF) with mutations E39D Y87S F88Y S247D in… · ONT B407 · binds ALA95, GLY96, LEU72, MET73, ALA95, GLY96, VAL97

Residues it binds most

LEU 14, ARG 14, ALA 9, GLY 6, TRP 9, GLU 7, PHE 7, MET 3, ASP 4, LYS 4 (residue and the binding sites it lines).

Found with

  • JFN · (2R)-1-methoxypropan-2-amine
  • CL · Chloride ion
  • ONW · (2~{R})-1-[(2~{R})-1-(2-methoxyethoxy)propan-2-yl]oxypropan-2-amine
  • SPD · Spermidine
  • SO4 · Sulfate ion
  • 3IE · (2~{S})-1-methoxypropan-2-amine
  • AG2 · Agmatine
  • PUT · 1,4-diaminobutane
  • 3IK · (2~{R})-1-[(2~{R})-1-[(2~{S})-1-[(2~{S})-1-(2-methoxyethoxy)propan-2-yl]oxypropan-2-yl]oxypropan-2-yl]oxypropan-2-amine
  • 4RH · (2~{R})-1-(2-methoxyethoxy)propan-2-amine
  • 4SW · (2~{S})-1-[(2~{R})-1-(2-methoxyethoxy)propan-2-yl]oxypropan-2-amine
  • EDO · 1,2-ethanediol

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