GL1X · GenesisL1 explorer

Ligand · OMP

OMP · Orotidine-5'-monophosphate

OMP, Orotidine-5'-monophosphate (C10 H13 N2 O11 P, 368.2 g/mol), in the MolNFT structures on GenesisL1: bound in 23 records (12 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…

Component
OMP
Formula
C10 H13 N2 O11 P
Class
ligand
Structures
23
PDB entries
12

Binding sites

OMP in 23 structures; the first of them:

  • 6YVK · Human OMPD-domain of UMPS in complex with the substrate OMP at 1.25 Angstroms resolution… · OMP A501 · binds SER257, ASP259, LYS281, HIS283, ASP312, ALY314, ASN341, GLU370 and 12 more
  • 6YVL · Human OMPD-domain of UMPS in complex with the substrate OMP at 1.25 Angstroms resolution… · OMP A501 · binds SER257, ASP259, LYS281, HIS283, ASP312, ALY314, ASN341, GLU370 and 12 more
  • 6YVM · Human OMPD-domain of UMPS in complex with the substrate OMP at 1.25 Angstroms resolution… · OMP A501 · binds SER257, ASP259, LYS281, HIS283, ASP312, ALY314, ASN341, GLU370 and 12 more
  • 6YVN · Human OMPD-domain of UMPS in complex with the substrate OMP at 1.25 Angstroms resolution… · OMP A501 · binds SER257, ASP259, LYS281, HIS283, ASP312, ALY314, ASN341, GLU370 and 12 more
  • 6ZX0 · OMPD-domain of human UMPS in complex with the substrate OMP at 1.25 Angstroms resolution · OMP A501 · binds SER257, ASP259, LYS281, HIS283, ASP312, ALY314, ASN341, MET371 and 9 more
  • 7AM9 · OMPD-domain of human UMPS in complex with the substrate OMP at 0.99 Angstroms resolution · OMP A501 · binds SER257, ASP259, LYS281, HIS283, ASP312, ALY314, ASN341, GLU370 and 12 more
  • 7OQF · Human OMPD-domain of UMPS in complex with OMP at 1.05 Angstrom resolution, 5 minutes… · OMP A504 · binds SER257, ASP259, LYS281, HIS283, ASP312, ALY314, ASN341, GLU370 and 15 more
  • 7OQI · Human OMPD-domain of UMPS in complex with substrate OMP at 1.15 Angstrom resolution, 10… · OMP A504 · binds SER257, ASP259, LYS281, HIS283, ASP312, ALY314, ASN341, GLU370 and 15 more
  • 7OQK · Human OMPD-domain of UMPS in complex with substrate OMP at 1.10 Angstroms resolution, 15… · OMP A504 · binds SER257, ASP259, LYS281, HIS283, ASP312, ALY314, ASN341, GLU370 and 15 more
  • 7OQM · Human OMPD-domain of UMPS in complex with substrate OMP at 1.05 Angstroms resolution, 20… · OMP A504 · binds SER257, ASP259, LYS281, HIS283, ASP312, ALY314, ASN341, GLU370 and 14 more
  • 7Q1H · Variant D312N of Orotidine 5'-monophosphate decarboxylase-domain of human UMPS in complex… · OMP A501 · binds SER257, LYS281, HIS283, ASN312, LYS314, ASN341, ILE368, GLU370 and 11 more
  • 6YVK · Human ompd-domain of umps in complex with the substrate omp at 1.25 ångströms resolution… · OMP A501 · binds SER257, ASP259, LYS281, HIS283, ASP312, ALY314, ASN341, MET371 and 9 more
  • 6YVL · Human ompd-domain of umps in complex with the substrate omp at 1.25 ångströms resolution… · OMP A501 · binds SER257, ASP259, LYS281, HIS283, ASP312, ALY314, ASN341, MET371 and 9 more
  • 6YVM · Human ompd-domain of umps in complex with the substrate omp at 1.25 ångströms resolution… · OMP A501 · binds SER257, ASP259, LYS281, HIS283, ASP312, ALY314, ASN341, MET371 and 9 more
  • 6YVN · Human ompd-domain of umps in complex with the substrate omp at 1.25 ångströms resolution… · OMP A501 · binds SER257, ASP259, LYS281, HIS283, ASP312, ALY314, ASN341, MET371 and 9 more
  • 6YVO · Human ompd-domain of umps in complex with the substrate omp at 1.25 ångströms resolution… · OMP A501 · binds SER257, ASP259, LYS281, HIS283, ASP312, ALY314, ASN341, MET371 and 9 more
  • 6ZX0 · Ompd-domain of human umps in complex with the substrate omp at 1.25 ångströms resolution · OMP A501 · binds SER257, ASP259, LYS281, HIS283, ASP312, ALY314, ASN341, MET371 and 9 more
  • 7AM9 · Ompd-domain of human umps in complex with the substrate omp at 0.99 ångströms resolution · OMP A501 · binds SER257, ASP259, LYS281, HIS283, ASP312, ALY314, ASN341, MET371 and 9 more
  • 7OQF · Human ompd-domain of umps in complex with omp at 1.05 ångström resolution, 5 minutes… · OMP A504 · binds SER257, ASP259, LYS281, HIS283, ASP312, ALY314, ASN341, MET371 and 12 more
  • 7OQI · Human ompd-domain of umps in complex with substrate omp at 1.15 ångström resolution, 10… · OMP A504 · binds SER257, ASP259, LYS281, HIS283, ASP312, ALY314, ASN341, MET371 and 12 more
  • 7OQK · Human ompd-domain of umps in complex with substrate omp at 1.10 ångströms resolution, 15… · OMP A504 · binds SER257, ASP259, LYS281, HIS283, ASP312, ALY314, ASN341, MET371 and 12 more
  • 7OQM · Human ompd-domain of umps in complex with substrate omp at 1.05 ångströms resolution, 20… · OMP A504 · binds SER257, ASP259, LYS281, HIS283, ASP312, ALY314, ASN341, MET371 and 11 more
  • 7Q1H · Variant D312N of orotidine 5'-monophosphate decarboxylase-domain of human umps in complex… · OMP A501 · binds SER257, LYS281, HIS283, ASN312, LYS314, ASN341, MET371, SER372 and 7 more

Residues it binds most

ILE 27, ASP 25, SER 27, GLY 27, VAL 24, ASN 27, LYS 27, ARG 27, GLN 27, HIS 27 (residue and the binding sites it lines).

Found with

  • SO4 · Sulfate ion
  • U · Uridine-5'-monophosphate
  • GOL · Glycerol
  • PRO · Proline

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.