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Ligand · OA8

OA8 · {[(2R,3S,4R,5S,6S)-3-(acetyloxy)-5-acetamido-4,6-dihydroxyoxan-2-yl]methoxy}phosphonic acid

OA8, {[(2R,3S,4R,5S,6S)-3-(acetyloxy)-5-acetamido-4,6-dihydroxyoxan-2-yl]methoxy}phosphonic acid (C10 H18 N O10 P, 343.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues…

Component
OA8
Formula
C10 H18 N O10 P
Class
ligand
Structures
2
PDB entries
1

Binding sites

OA8 in 2 structures; the first of them:

  • 6Y54 · Crystal structure of a Neisseria meningitidis serogroup A capsular oligosaccharide bound… · OA8 L303 · binds VAL99, ARG100, TYR31, ASN35, TYR37, HIS39, LEU51, TYR54 and 3 more
  • 6Y54 · Crystal structure of a neisseria meningitidis serogroup a capsular oligosaccharide bound… · OA8 L303 · binds VAL99, ARG100, TYR31, ASN35, TYR37, HIS39, LEU51, TYR54 and 3 more

Residues it binds most

TYR 6, ASN 6, ARG 6, HIS 6, LYS 6, VAL 6, LEU 4, THR 2 (residue and the binding sites it lines).

Found with

  • OAB · {[(2R,3S,4R,5S,6S)-5-acetamido-3,6-dihydroxy-4-(2-oxopropyl)oxan-2-yl]methoxy}phosphonic acid
  • OOW · {[(2R,3S,4R,5S,6R)-5-acetamido-3-hydroxy-4-(2-oxopropyl)-6-(phosphonooxy)oxan-2-yl]methoxy}phosphonic acid
  • IOD · Iodide ion
  • EDO · 1,2-ethanediol

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