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Ligand · NP6

NP6 · [[(3R,4R,5S,6R)-3-(butanoylamino)-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-ylidene]amino] N-phenylcarbamate

NP6, [[(3R,4R,5S,6R)-3-(butanoylamino)-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-ylidene]amino] N-phenylcarbamate (C17 H23 N3 O7, 381.4 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with…

Component
NP6
Formula
C17 H23 N3 O7
Class
ligand
Structures
4
PDB entries
2

Binding sites

NP6 in 4 structures; the first of them:

  • 2WCA · BtGH84 in complex with n-butyl pugnac · NP6 A900 · binds GLY135, PHE136, TYR137, CYS278, TYR282, TRP286, THR310, VAL314 and 8 more
  • 3GS6 · Vibrio Cholerea family 3 glycoside hydrolase (NagZ)in complex with N-butyryl-PUGNAc · NP6 A341 · binds ILE30, PHE32, ASP62, GLU64, ARG70, PHE114, ALA126, ILE127 and 8 more
  • 2WCA · BTGH84 in complex with N-butyl pugnac · NP6 A900 · binds GLY135, PHE136, TYR137, CYS278, TYR282, TRP286, THR310, VAL314 and 8 more
  • 3GS6 · Vibrio cholerea family 3 glycoside hydrolase (NAGZ)IN complex with N- butyryl-pugnac · NP6 A341 · binds ILE30, PHE32, ASP62, GLU64, ARG70, PHE114, ALA126, ILE127 and 8 more

Residues it binds most

ASP 4, HIS 4, ILE 4, PHE 4, TYR 2, ARG 2, ASN 2, MET 2, TRP 2, VAL 2 (residue and the binding sites it lines).

Found with

  • CA · Calcium ion
  • GOL · Glycerol

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